Publications & Patents

Journal
Tags
Brain Connectomes, Brain Imaging
Siamese Graph Convolutional Network Quantifies Increasing Structure-Function Discrepancy Over the Cognitive Decline Continuum
Gurur Gamgam; Zerrin Yildirim; Alkan Kabakcioglu; Hakan Gurvit; Tamer Demiralp; Burak Acar
Computer Methods and Programs in Biomedicine, Vol 254, (September 2024)
Conference
Tags
Brain Connectomes, Brain Imaging
Disentangled Attention Graph Neural Network for Alzheimer's Disease Diagnosis
Gurur Gamgam; Alkan Kabakcioglu; Demet Yuksel Dal; Burak Acar
Lecture Notes in Computer Science, Vol. TBD, pp. TBD ; Springer, 2024 (MICCAI 2024, Marrakesh, Morocco)
Theses
Tags
Brain Connectomes
Multi-Modal Tensor Representations of Brain Networks
Goktekin Durusoy
PhD Thesis, Bogazici University, EE Dept., Turkey, February 2021
Journal
Tags
Brain Connectomes
B-Tensor: Brain Connectome Tensor Factorization for Alzheimer’s Disease
Goktekin Durusoy, Zerrin Yıldırım, Demet Y. Dal, Cigdem Ulasoglu-Yildiz, Elif Kurt, Gunes Bayır, Erhan Ozacar, Evren Ozarslan, Aslı Demirtas-Tatlıdede, Basar Bilgic, Tamer Demiralp, Hakan Gurvit, Alkan Kabakcıoglu, Burak Acar
IEEE Journal of Biomedical and Health Informatics, 25/5, 1591-1600 (2021)
Conference
Tags
Brain Imaging, Brain Connectomes
Alzheimer Sürekliliğinde Forniks Ve Singulum Yolaklarındaki Fraksiyonel Anizotropi Değişimleri
Gözde Kızılateş Evin, Emre Harı, Ali Bayram, Çiğdem Ulaşoğlu Yıldız, Elif Kurt, Burak Acar, Tamer Demiralp, İ. Hakan Gürvit
18. ULUSAL SINIRBİLİM KONGRESİ, 6-9 Kasım 2020, Bilkent Üniversitesi, Ankara
Conference
Tags
Brain Connectomes, Brain Imaging
Alzheimer Hastalığında Olağan Durum Ve Dikkat Çekerlik Ağının Fonksiyonel Bağlantısallık Değişimleri
Elif Kurt, Emre Harı, Kardelen Eryürek, Çiğdem Ulaşoğlu Yıldız, Elif Yıldırım, Ezgi Soncu Büyükişcan, Burak Acar, Hakan Gürvit, Tamer Demiralp
18. ULUSAL SINIRBİLİM KONGRESİ, 6-9 Kasım 2020, Bilkent Üniversitesi, Ankara
Conference
Tags
Brain Connectomes, Brain Imaging
Brain Connectome Analysis via Tensor Factorization
Burak Acar
2. Multidisipliner Nörodejenerasyon Kongresi, Üsküdar Üniversitesi, 6-7 Kasım 2020
Conference
Tags
Brain Connectomes
Alzheimer Sürekliliğinde Papez Devresinin Fonksiyonel Bağlantısallık Değişiklikleri
Hari E., Eryurek K., Bayram A., Acar B., Demiralp T., Gurvit H.
55. Ulusal Noroloji Kongresi, 15-21 Nov. 2019, Antalya, Turkey
Theses
Tags
Brain Connectomes
Structural Brain Connectome Embedding For Alzheimer's Disease
Gurur Gamgam
MS Thesis, Bogazici University, EE Dept., Turkey, July 2019
Conference
Tags
Brain Connectomes
fMRI Guided Personalization of Cortical Parcellation Maps
Onay M.S., Kucukaslan U., Acar B.
RSNA 2018, Chicago, USA
Conference
Tags
Brain Connectomes
Multi-modal Brain Tensor Factorization: Preliminary Results with AD Patients
Durusoy G., Karaaslanlı A., Yüksel Dal D., Yıldırım Z., Acar B.
In: Wu G., Rekik I., Schirmer M., Chung A., Munsell B. (eds) Connectomics in NeuroImaging. CNI 2018. Lecture Notes in Computer Science, vol 11083. Springer, Cham
Theses
Tags
Brain Connectomes
Seed-based and Data-driven Analyses of Default Mode Network Connectivity Measures in Dementia
Basak Kilic
MS Thesis, Bogazici University, Systems and Control Eng. Program, Turkey January 2017
Conference
Tags
Brain Connectomes
Differential Resting State Connectivity and Its Relationship with Cognitive Performance among Participants with Subjective Cognitive Impairment (SCI), Mild Cognitive Impairment (MCI), and Early Stage Alzheimer’s Disease (AD)
Yildirim E., Buyukiscan E.S., Kurt E., Yildiz C.U., Tatlidede A.D., Bilgiç B., Hanagasi H., Bayram A., Acar B., Demiralp T, Gurvit H.I.
AAIC 2017, London, England
Journal
Tags
Brain Connectomes, Brain Imaging
SMT: A Reliability Based Interactive DTI Tractography Algorithm
Yoldemir B., Acar B., Firat Z., Kilickesmez O.
IEEE Transactions on Medical Imaging, October 2012, Vol. 31-10, pp. 1929-1940.
Theses
Tags
Brain Connectomes, Brain Imaging
Assessing DT-MRI Tractography Results via Sampling The Fiber Tract Space
A. Burak Yoldemir
MS Thesis, Bogazici University, Electrical & Electronics Eng. Dept., Turkey June 2011
Conference
Tags
Brain Connectomes, Brain Imaging
bootSMT:Bootstrap Split/Merge Fiber Tractography for DT-MRI Data
Yoldemir A.B., Acar B.
RSNA 2011, Chicago, USA
Conference
Tags
Brain Connectomes, Brain Imaging
A Pointwise Correspondence Based DT-MRI Fiber Similarity Measure
Berkiten S., Acar B.
Proc. 32nd Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC2010), Buenos Aires, Argentina, IEEE, 2010
Book Chapter/Section
Tags
Brain Connectomes, Brain Imaging
Similar Tensor Arrays: A Framework for Storage of Tensor Array Data
Brun, A., Martin-Fernandez, M., Acar, B., Munoz-Moreno, E., Cammoun, L., Sigfridsson, A., Sosa-Cabrera, D., Svensson, B., Herberthson, M., Knutsson, H.
Tensors in Image Processing and Computer Vision, Aja-Fernández, S.; de Luis García, R.; Tao, D.; Li, X. (Eds.), Series: Advances in Pattern Recognition, ISBN: 978-1-84882-298-6, Springer, 2009
Conference
Tags
Brain Imaging, Brain Connectomes
SMT: Split & Merge Fiber Tractography for DT-MRI
Bozkaya U., Acar B.
Lecture Notes in Computer Science, Vol. 4792, pp.153-160 ; Springer, 2007 (MICCAI 2007, Brisbane, Australia)
Theses
Tags
Brain Connectomes, Brain Imaging
SMT: Split/Merge Fiber Tractography
Ugur Bozkaya
MS Thesis, Bogazici University, Institute of Biomedical Engineering, Turkey May 2006
Conference
Tags
Brain Connectomes, Brain Imaging
Comparative Assessment Of DT-MRI Fiber Tractography Algorithms
Acar B., Bammer R., Moseley M.E.
Proceedings of ISMRM 2003, pp. 2164, July 2003, Toronto, Canada